\documentclass[titlepage]{article} \usepackage{array,amsmath,amssymb,mathtools,graphicx,rotating,caption,mdframed,color,appendix,xcolor,colortbl,lineno} \usepackage[color=lightgray]{todonotes} \usepackage{float,rotfloat,subfig,longtable,authblk,placeins,url,tabu,enumitem,pdflscape,ragged2e} \usepackage[in]{fullpage} \usepackage{setspace} \doublespacing \makeindex \title{Norovirus transmission dynamics: a modelling review\\Supplementary Material} \author{K. A. M. Gaythorpe\thanks{University of Cambridge}, C. L. Trotter$^1$, B. Lopman \thanks{Emory University}, M. Steele$^2$, A. J. K. Conlan$^1$} \DeclareGraphicsExtensions{.pdf,.png,.jpg,.tif} \linenumbers \begin{document} \maketitle \section{Search methods} \renewcommand{\thefigure}{S\arabic{figure}} \textcolor{red}{We conducted both a string search in google scholar, reference tracing and a search of the database PubMed. The PubMed search criterion are shown below and the results were organised as shown in figure \ref{fig:flowchartPubMed}.} \begin{verbatim} ("norovirus"[MeSH Terms] OR "norovirus"[All Fields]) OR Norwalk}[All Fields] AND ("models, theoretical"[MeSH Terms] OR ("models"[All Fields] AND "theoretical"[All Fields]) OR "theoretical models"[All Fields] OR ("mathematical"[All Fields] AND "modelling"[All Fields]) OR ("mathematical"[All Fields] AND "modeling"[All Fields]) OR "mathematical modelling"[All Fields]) OR (("transmission"[Subheading] OR "transmission"[All Fields]) AND ("Dynamics"[Journal] OR "dynamics"[All Fields]) AND {R0[All Fields]) OR ("basic reproduction number"[MeSH Terms] OR ("basic"[All Fields] AND "reproduction"[All Fields] AND "number"[All Fields]) OR "basic reproduction number"[All Fields] OR "basic reproductive number"[All Fields]) \end{verbatim} \begin{figure}[h] \centering \includegraphics[scale=0.5]{Gaythorpe_searchflow_revised} \caption{Flowchart of literature search conducted in PubMed, additional results were found through Google Scholar and reference tracing.} \label{fig:flowchartPubMed} \end{figure} \FloatBarrier \bibliographystyle{IEEEtran} \bibliography{ModelReviewBibliography} \end{document}